lmpy.tools.wrangle_tree

A tool for wrangling phylogenetic trees.

Module Contents

Functions

cli()

Command-line interface for the tool.

wrangle_tree(tree, wranglers)

Wrangle the tree as configured.
lmpy.tools.wrangle_tree.cli()[source]

Command-line interface for the tool.

lmpy.tools.wrangle_tree.wrangle_tree(tree, wranglers)[source]

Wrangle the tree as configured.

Parameters

  • tree (TreeWrapper) – A phylogenetic tree to wrangle.

  • wranglers (list) – A list of tree data wranglers.

Returns

The modified tree object. dict: Wrangler reporting information

Return type

TreeWrapper