lmpy.tools.randomize_pam

This script will randomize a PAM while maintaining marginal totals.

Module Contents

Functions

cli()

Function providing a command line interface to the tool.

randomize_pam(in_pam)

Randomize a PAM.
lmpy.tools.randomize_pam.cli()[source]

Function providing a command line interface to the tool.

lmpy.tools.randomize_pam.randomize_pam(in_pam)[source]

Randomize a PAM.

Parameters

in_pam (Matrix) – The input PAM to be randomized.

Returns

A randomized PAM that maintains marginal totals.

Return type

Matrix